rs397509229
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common in clinvar |
(G;T) | 6 | BRCA1 variant considered pathogenic for breast cancer |
Make rs397509229(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43063898 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs397509229 |
dbSNP (classic) | rs397509229 |
ClinGen | rs397509229 |
ebi | rs397509229 |
HLI | rs397509229 |
Exac | rs397509229 |
Gnomad | rs397509229 |
Varsome | rs397509229 |
LitVar | rs397509229 |
Map | rs397509229 |
PheGenI | rs397509229 |
Biobank | rs397509229 |
1000 genomes | rs397509229 |
hgdp | rs397509229 |
ensembl | rs397509229 |
geneview | rs397509229 |
scholar | rs397509229 |
rs397509229 | |
pharmgkb | rs397509229 |
gwascentral | rs397509229 |
openSNP | rs397509229 |
23andMe | rs397509229 |
SNPshot | rs397509229 |
SNPdbe | rs397509229 |
MSV3d | rs397509229 |
GWAS Ctlg | rs397509229 |
Max Magnitude | 6 |
c.5128G>T (p.Gly1710Ter)
ClinVar clinical significance not provided
ClinVar | |
---|---|
Risk | rs397509229(A;A) rs397509229(T;T) |
Alt | rs397509229(A;A) rs397509229(T;T) |
Reference | Rs397509229(G;G) |
Significance | Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer |
Variation | info |
Gene | BRCA1 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 1 |
Reversed | 1 |
HGVS | NC_000017.10:g.41215915C>A |
CLNSRC | ClinVar |
CLNACC | RCV000048805.2, RCV000256527.2, |