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rs4635969

From SNPedia

Orientationminus
Stabilizedminus
Make rs4635969(C;C)
Make rs4635969(C;T)
Make rs4635969(T;T)
ReferenceGRCh38 38.1/141
Chromosome5
Position1308437
GeneMIR4457
is asnp
is mentioned by
dbSNPrs4635969
ebirs4635969
HLIrs4635969
Exacrs4635969
Varsomers4635969
Maprs4635969
PheGenIrs4635969
hapmaprs4635969
1000 genomesrs4635969
hgdprs4635969
ensemblrs4635969
gopubmedrs4635969
geneviewrs4635969
scholarrs4635969
googlers4635969
pharmgkbrs4635969
gwascentralrs4635969
openSNPrs4635969
23andMers4635969
23andMe allrs4635969
SNP Nexus

SNPshotrs4635969
SNPdbers4635969
MSV3drs4635969
GWAS Ctlgrs4635969
GMAF0.1974
Max Magnitude
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 20543847OA-icon.png]
Trait Testicular germ cell cancer
Title Variants near DMRT1, TERT and ATF7IP are associated with testicular germ cell cancer
Risk Allele T
P-val 1E-23
Odds Ratio 1.54 [1.33-1.79]
OMIM273300
Desc
Variant
Relatedalso
[PMID 21617256OA-icon.png] Variants in or near KITLG, BAK1, DMRT1, and TERT-CLPTM1L predispose to familial testicular germ cell tumour


[PMID 19836008OA-icon.png] A genome-wide association study of lung cancer identifies a region of chromosome 5p15 associated with risk for adenocarcinoma.


[PMID 20101243OA-icon.png] A genome-wide association study identifies pancreatic cancer susceptibility loci on chromosomes 13q22.1, 1q32.1 and 5p15.33.


[PMID 22213090] Fine-mapping of a region of chromosome 5p15.33 (TERT-CLPTM1L) suggests a novel locus in TERT and a CLPTM1L haplotype are associated with glioma susceptibility in a Chinese population.


[PMID 22523397OA-icon.png] Telomerase reverse transcriptase locus polymorphisms and cancer risk: a field synopsis and meta-analysis.

GWAS snp
PMID [PMID 23666240OA-icon.png]
Trait Testicular germ cell tumor
Title Identification of nine new susceptibility loci for testicular cancer, including variants near DAZL and PRDM14.
Risk Allele T
P-val 5E-24
Odds Ratio 1.39 [1.25-1.54]