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rs6065

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(C;C) 0 common in complete genomics
Make rs6065(C;T)
Make rs6065(T;T)
ReferenceGRCh38 38.1/141
Chromosome17
Position4933086
GeneGP1BA
is asnp
is mentioned by
dbSNPrs6065
ebirs6065
HLIrs6065
Exacrs6065
Varsomers6065
Maprs6065
PheGenIrs6065
hapmaprs6065
1000 genomesrs6065
hgdprs6065
ensemblrs6065
gopubmedrs6065
geneviewrs6065
scholarrs6065
googlers6065
pharmgkbrs6065
gwascentralrs6065
openSNPrs6065
23andMers6065
23andMe allrs6065
SNP Nexus

SNPshotrs6065
SNPdbers6065
MSV3drs6065
GWAS Ctlgrs6065
GMAF0.1295
Max Magnitude0
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 20139978]
Trait Hematological and biochemical traits
Title Genome-wide association study of hematological and biochemical traits in a Japanese population
Risk Allele T
P-val 2E-12
Odds Ratio 0.33 [NR] % variance


[PMID 20472470] Impact of COX-2 rs5275 and rs20417 and GPIIIa rs5918 Polymorphisms on 90-Day Ischemic Stroke Functional Outcome: A Novel Finding



[PMID 22133274OA-icon.png] Polymorphisms of PAI-1 and platelet GP Ia may associate with impairment of renal function and thrombocytopenia in Puumala hantavirus infection


[PMID 18403734] Polymorphisms in platelet glycoprotein 1balpha and factor VII and risk of ischemic stroke: a meta-analysis.


[PMID 22388798OA-icon.png] Gene panels to help identify subgroups at high and low risk of coronary heart disease among those randomized to antihypertensive treatment: the GenHAT study.


GET Evidence
GP1BA-T161M
aa_change Thr161Met
aa_change_short T161M
impact not reviewed
qualified_impact Insufficiently evaluated not reviewed
overall_frequency 0.122019
summary



GWAS snp
PMID [PMID 22139419OA-icon.png]
Trait Platelet counts
Title New gene functions in megakaryopoiesis and platelet formation.
Risk Allele T
P-val 3E-11
Odds Ratio 4.19 [2.96-5.43] 10^9/l increase


[PMID 27401010] Association of BAK1 single nucleotide polymorphism with a risk for dengue hemorrhagic fever.


ClinVar
Risk rs6065(T;T)
Alt rs6065(T;T)
Reference rs6065(C;C)
Significance Drug-response
Disease aspirin response - Efficacy
Variation info
Gene GP1BA
CLNDBN aspirin response - Efficacy
Reversed 0
HGVS NC_000017.10:g.4836381C>T
CLNSRC PharmGKB Clinical Annotation PharmGKB
CLNACC RCV000211296.1,