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rs6469804

From SNPedia

Orientationplus
Stabilizedplus
Make rs6469804(A;A)
Make rs6469804(A;G)
Make rs6469804(G;G)
ReferenceGRCh38 38.1/141
Chromosome8
Position119032590
GeneCOLEC10
is asnp
is mentioned by
dbSNPrs6469804
ebirs6469804
HLIrs6469804
Exacrs6469804
Varsomers6469804
Maprs6469804
PheGenIrs6469804
hapmaprs6469804
1000 genomesrs6469804
hgdprs6469804
ensemblrs6469804
gopubmedrs6469804
geneviewrs6469804
scholarrs6469804
googlers6469804
pharmgkbrs6469804
gwascentralrs6469804
openSNPrs6469804
23andMers6469804
23andMe allrs6469804
SNP Nexus

SNPshotrs6469804
SNPdbers6469804
MSV3drs6469804
GWAS Ctlgrs6469804
GMAF0.2773
Max Magnitude
? (A;A) (A;G) (G;G) 28

news rs6469792 and rs6469804 association with bone mineral density.

GWAS
SNP rs6469804
PubMedID [PMID 18445777]
Condition Bone mineral density (spine)
Gene OPG
Risk Allele A
pValue 7.00E-015
OR 0.12
95% CI 0.09-0.15) SD decreas


OMIM612113
DescBONE MINERAL DENSITY QUANTITATIVE TRAIT LOCUS 10; BMND10
Variant
Relatedalso
[PMID 18455228OA-icon.png] Bone mineral density, osteoporosis, and osteoporotic fractures: a genome-wide association study.


[PMID 19181680OA-icon.png] Common variants in the region around Osterix are associated with bone mineral density and growth in childhood.


[PMID 20548944OA-icon.png] An integration of genome-wide association study and gene expression profiling to prioritize the discovery of novel susceptibility Loci for osteoporosis-related traits.


[PMID 20554715] Analysis of recently identified osteoporosis susceptibility genes in Han Chinese women.


GET Evidence
rs6469804
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.6875
summary