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rs6477872

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(T;T) 0
Make rs6477872(C;C)
Make rs6477872(C;T)
ReferenceGRCh38 38.1/141
Chromosome9
Position97069874
GeneTCEA1P1
is asnp
is mentioned by
dbSNPrs6477872
ebirs6477872
HLIrs6477872
Exacrs6477872
Varsomers6477872
Maprs6477872
PheGenIrs6477872
hapmaprs6477872
1000 genomesrs6477872
hgdprs6477872
ensemblrs6477872
gopubmedrs6477872
geneviewrs6477872
scholarrs6477872
googlers6477872
pharmgkbrs6477872
gwascentralrs6477872
openSNPrs6477872
23andMers6477872
23andMe allrs6477872
SNP Nexus

SNPshotrs6477872
SNPdbers6477872
MSV3drs6477872
GWAS Ctlgrs6477872
GMAF0.174
Max Magnitude0
? (C;C) (C;T) (T;T) 28
Rs6477872
PubMed [PMID 17869649]
Affy Probeset SNP_A-2014384
Affy Orientation same
On GW 5.0
Alleles A/B C/T
Ancestral T
Population German
Allele C
Case Freq. 0.38
Control Freq. 0.31
Odds Ratio Het
Odds Ratio Hom
Odds Ratio All 1.38
Disease Myasthenia gravis (MG)


rs6477872 is in linkage disequilibrium with a polymorphism that increases susceptibility to Myasthenia gravis 1.38 times for carriers of the C allele [PMID 17869649]

rs6477872 is in linkage disequilibrium with a polymorphism that increases susceptibility to Myasthenia gravis, early onset 1.82 times for carriers of the C allele [PMID 17869649]