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rs6584283

From SNPedia

Orientationplus
Stabilizedplus
Make rs6584283(C;C)
Make rs6584283(C;T)
Make rs6584283(T;T)
ReferenceGRCh38 38.1/142
Chromosome10
Position99530544
GeneLINC01475
is asnp
is mentioned by
dbSNPrs6584283
ebirs6584283
HLIrs6584283
Exacrs6584283
Varsomers6584283
Maprs6584283
PheGenIrs6584283
hapmaprs6584283
1000 genomesrs6584283
hgdprs6584283
ensemblrs6584283
gopubmedrs6584283
geneviewrs6584283
scholarrs6584283
googlers6584283
pharmgkbrs6584283
gwascentralrs6584283
openSNPrs6584283
23andMers6584283
23andMe allrs6584283
SNP Nexus

SNPshotrs6584283
SNPdbers6584283
MSV3drs6584283
GWAS Ctlgrs6584283
GMAF0.4385
Max Magnitude
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 19915572OA-icon.png]
Trait Ulcerative colitis
Title Genome-wide association study of ulcerative colitis identifies three new susceptibility loci, including the HNF4A region
Risk Allele
P-val 2E-7
Odds Ratio NR NR
GWAS snp
PMID [PMID 20228798]
Trait Ulcerative colitis
Title Genome-wide association study for ulcerative colitis identifies risk loci at 7q22 and 22q13 (IL17REL)
Risk Allele T
P-val 0.000002
Odds Ratio 1.22 [1.12-1.32]
GWAS snp
PMID [PMID 21297633OA-icon.png]
Trait
Title Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47
Risk Allele T
P-val 8E-21
Odds Ratio 1.2100 [1.16-1.26]


GET Evidence
rs6584283
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.5625
summary