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rs6601764

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(C;C) 2 1.52x increased risk of developing Crohn's disease
(C;T) 1.5 1.16x increased risk of developing Crohn's disease
(T;T) 1 Normal risk of developing Crohn's disease
ReferenceGRCh38 38.1/142
Chromosome10
Position3820350
is asnp
is mentioned by
dbSNPrs6601764
ebirs6601764
HLIrs6601764
Exacrs6601764
Varsomers6601764
Maprs6601764
PheGenIrs6601764
hapmaprs6601764
1000 genomesrs6601764
hgdprs6601764
ensemblrs6601764
gopubmedrs6601764
geneviewrs6601764
scholarrs6601764
googlers6601764
pharmgkbrs6601764
gwascentralrs6601764
openSNPrs6601764
23andMers6601764
23andMe allrs6601764
SNP Nexus

SNPshotrs6601764
SNPdbers6601764
MSV3drs6601764
GWAS Ctlgrs6601764
GMAF0.3669
Max Magnitude2
? (C;C) (C;T) (T;T) 28
rs6601764 has been reported in a large study to be associated with Crohn's disease.

The risk allele (oriented to the dbSNP entry) is (C); the odds ratio associated with heterozygotes is 1.16 (CI 1.01-1.33), and for homozygotes, 1.52 (CI 1.28-1.80). [PMID 17554300OA-icon.png]


GET Evidence
rs6601764
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.453125
summary