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rs6684514

From SNPedia

Orientationplus
Stabilizedplus
Make rs6684514(A;A)
Make rs6684514(A;G)
Make rs6684514(G;G)
ReferenceGRCh38 38.1/141
Chromosome1
Position156285665
GeneSMG5, TMEM79
is asnp
is mentioned by
dbSNPrs6684514
ebirs6684514
HLIrs6684514
Exacrs6684514
Varsomers6684514
Maprs6684514
PheGenIrs6684514
hapmaprs6684514
1000 genomesrs6684514
hgdprs6684514
ensemblrs6684514
gopubmedrs6684514
geneviewrs6684514
scholarrs6684514
googlers6684514
pharmgkbrs6684514
gwascentralrs6684514
openSNPrs6684514
23andMers6684514
23andMe allrs6684514
SNP Nexus

SNPshotrs6684514
SNPdbers6684514
MSV3drs6684514
GWAS Ctlgrs6684514
GMAF0.2112
Max Magnitude
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 20139978]
Trait Hematological and biochemical traits
Title Genome-wide association study of hematological and biochemical traits in a Japanese population
Risk Allele A
P-val 3E-9
Odds Ratio 0.24 [NR] % variance


GET Evidence
TMEM79-V147M
aa_change Val147Met
aa_change_short V147M
impact not reviewed
qualified_impact Insufficiently evaluated not reviewed
overall_frequency 0.235267
summary



GWAS snp
PMID [PMID 24647736OA-icon.png]
Trait Glycated hemoglobin levels
Title Multiple nonglycemic genomic loci are newly associated with blood level of glycated hemoglobin in East Asians.
Risk Allele G
P-val 1E-23
Odds Ratio .09 [0.070-0.110] unit increase