rs6971499
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs6971499(C;C) |
| Make rs6971499(C;T) |
| Make rs6971499(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 7 |
| Position | 130995762 |
| Gene | LINC-PINT |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6971499 |
| dbSNP (classic) | rs6971499 |
| ClinGen | rs6971499 |
| ebi | rs6971499 |
| HLI | rs6971499 |
| Exac | rs6971499 |
| Gnomad | rs6971499 |
| Varsome | rs6971499 |
| LitVar | rs6971499 |
| Map | rs6971499 |
| PheGenI | rs6971499 |
| Biobank | rs6971499 |
| 1000 genomes | rs6971499 |
| hgdp | rs6971499 |
| ensembl | rs6971499 |
| geneview | rs6971499 |
| scholar | rs6971499 |
| rs6971499 | |
| pharmgkb | rs6971499 |
| gwascentral | rs6971499 |
| openSNP | rs6971499 |
| 23andMe | rs6971499 |
| SNPshot | rs6971499 |
| SNPdbe | rs6971499 |
| MSV3d | rs6971499 |
| GWAS Ctlg | rs6971499 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
A 2014 study "Genome-wide association study identifies multiple susceptibility loci for pancreatic cancer" of 7,683 European cases and 14,397 controls found the minor allele rs6971499(C) in LINC-PINT (long intergenic non-protein coding RNA, p53 induced transcript) conferring a protective effect of statistically genome-wide significance (per-allele odds ratio (OR) = 0.79, 95% confidence interval (CI) 0.74-0.84, P = 3.0E-12) against Pancreatic cancer.
[PMID 25086665
] Genome-wide association study identifies multiple susceptibility loci for pancreatic cancer
