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rs7140561

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(C;C) 0 common in complete genomics
Make rs7140561(C;T)
Make rs7140561(T;T)
ReferenceGRCh38 38.1/141
Chromosome14
Position39267476
GeneATP5J2LP, CTAGE5
is asnp
is mentioned by
dbSNPrs7140561
ebirs7140561
HLIrs7140561
Exacrs7140561
Varsomers7140561
Maprs7140561
PheGenIrs7140561
hapmaprs7140561
1000 genomesrs7140561
hgdprs7140561
ensemblrs7140561
gopubmedrs7140561
geneviewrs7140561
scholarrs7140561
googlers7140561
pharmgkbrs7140561
gwascentralrs7140561
openSNPrs7140561
23andMers7140561
23andMe allrs7140561
SNP Nexus

SNPshotrs7140561
SNPdbers7140561
MSV3drs7140561
GWAS Ctlgrs7140561
GMAF0.06107
Max Magnitude0
? (C;C) (C;T) (T;T) 28


Venter snp
Source plos
Gene CTAGE5
allele C
frequency
sift TOLERATED
HuRef 1103649039209
Disease Association Autoantigen found several cancer, including benign meningioma and cutaneous T-cell lymphoma (CTCL). Isoform 5A and isoform 5B are recognized by patients'sera with tumor specimen of various origins.



GET Evidence
CTAGE5-V6A
aa_change Val6Ala
aa_change_short V6A
impact not reviewed
qualified_impact Insufficiently evaluated not reviewed
overall_frequency 0.947481
summary