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rs7554511

From SNPedia

Orientationplus
Stabilizedplus
Make rs7554511(A;A)
Make rs7554511(A;C)
Make rs7554511(C;C)
ReferenceGRCh38 38.1/141
Chromosome1
Position200908434
GeneC1orf106
is asnp
is mentioned by
dbSNPrs7554511
ebirs7554511
HLIrs7554511
Exacrs7554511
Varsomers7554511
Maprs7554511
PheGenIrs7554511
hapmaprs7554511
1000 genomesrs7554511
hgdprs7554511
ensemblrs7554511
gopubmedrs7554511
geneviewrs7554511
scholarrs7554511
googlers7554511
pharmgkbrs7554511
gwascentralrs7554511
openSNPrs7554511
23andMers7554511
23andMe allrs7554511
SNP Nexus

SNPshotrs7554511
SNPdbers7554511
MSV3drs7554511
GWAS Ctlgrs7554511
GMAF0.1543
Max Magnitude
? (A;A) (A;C) (C;C) 28
GWAS snp
PMID [PMID 19915572OA-icon.png]
Trait Ulcerative colitis
Title Genome-wide association study of ulcerative colitis identifies three new susceptibility loci, including the HNF4A region
Risk Allele
P-val 0.000001
Odds Ratio NR NR
GWAS snp
PMID [PMID 21297633OA-icon.png]
Trait
Title Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47
Risk Allele C
P-val 2E-13
Odds Ratio 1.1900 [1.14-1.25]


GET Evidence
rs7554511
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.226562
summary



GWAS snp
PMID [PMID 23128233OA-icon.png]
Trait Inflammatory bowel disease
Title Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.
Risk Allele C
P-val 1E-32
Odds Ratio 1.16 [1.128-1.202]
GWAS snp
PMID [PMID 21102463OA-icon.png]
Trait Crohn's disease
Title Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci.
Risk Allele C
P-val 2E-7
Odds Ratio 1.14 [1.08-1.19]