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rs7842601

From SNPedia

Orientationplus
Stabilizedplus
Make rs7842601(C;C)
Make rs7842601(C;T)
Make rs7842601(T;T)
ReferenceGRCh38 38.1/141
Chromosome8
Position42681912
is asnp
is mentioned by
dbSNPrs7842601
ebirs7842601
HLIrs7842601
Exacrs7842601
Varsomers7842601
Maprs7842601
PheGenIrs7842601
hapmaprs7842601
1000 genomesrs7842601
hgdprs7842601
ensemblrs7842601
gopubmedrs7842601
geneviewrs7842601
scholarrs7842601
googlers7842601
pharmgkbrs7842601
gwascentralrs7842601
openSNPrs7842601
23andMers7842601
23andMe allrs7842601
SNP Nexus

SNPshotrs7842601
SNPdbers7842601
MSV3drs7842601
GWAS Ctlgrs7842601
GMAF0.3191
Max Magnitude
? (C;C) (C;T) (T;T) 28
Rs7842601
PubMed [PMID 17135278OA-icon.png]
Affy Probeset SNP_A-8559219
Affy Orientation same
On GW 5.0
Alleles A/B C/T
Ancestral T
Population Caucasian (USA, Australia)
Allele T
Case Freq.
Control Freq.
Odds Ratio Het
Odds Ratio Hom
Odds Ratio All 1.35
Disease Substance dependence, Nicotine (SD-N)


rs7842601 is in linkage disequilibrium with a polymorphism that increases susceptibility to Substance dependence, Nicotine 1.35 times for carriers of the T allele [PMID 17135278OA-icon.png]