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rs7993214

From SNPedia

Orientationplus
Stabilizedplus
Make rs7993214(C;C)
Make rs7993214(C;T)
Make rs7993214(T;T)
ReferenceGRCh38 38.1/141
Chromosome13
Position39776775
GeneCOG6
is asnp
is mentioned by
dbSNPrs7993214
ebirs7993214
HLIrs7993214
Exacrs7993214
Varsomers7993214
Maprs7993214
PheGenIrs7993214
hapmaprs7993214
1000 genomesrs7993214
hgdprs7993214
ensemblrs7993214
gopubmedrs7993214
geneviewrs7993214
scholarrs7993214
googlers7993214
pharmgkbrs7993214
gwascentralrs7993214
openSNPrs7993214
23andMers7993214
23andMe allrs7993214
SNP Nexus

SNPshotrs7993214
SNPdbers7993214
MSV3drs7993214
GWAS Ctlgrs7993214
GMAF0.2952
Max Magnitude
? (C;C) (C;T) (T;T) 28
[PMID 18369459OA-icon.png] rs7993214 was a significant SNP associated with risk for psoriasis in a large US/UK study.
GWAS
SNP rs7993214
PubMedID [PMID 18369459OA-icon.png]
Condition Psoriasis
Gene COG6
Risk Allele
pValue 2.00E-006
OR 1.41
95% CI 1.22-1.61



[PMID 20722033OA-icon.png] The susceptibility loci juvenile idiopathic arthritis shares with other autoimmune diseases extend to PTPN2, COG6, and ANGPT1.


GET Evidence
rs7993214
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.734375
summary