rs80359470
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;A) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(-;AA) | 6 | Likely miscall in Ancestry v2c data; otherwise, BRCA2 variant considered pathogenic for breast cancer |
(AA;AA) | 0 | common in clinvar |
Make rs80359470(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32339231 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80359470 |
dbSNP (classic) | rs80359470 |
ClinGen | rs80359470 |
ebi | rs80359470 |
HLI | rs80359470 |
Exac | rs80359470 |
Gnomad | rs80359470 |
Varsome | rs80359470 |
LitVar | rs80359470 |
Map | rs80359470 |
PheGenI | rs80359470 |
Biobank | rs80359470 |
1000 genomes | rs80359470 |
hgdp | rs80359470 |
ensembl | rs80359470 |
geneview | rs80359470 |
scholar | rs80359470 |
rs80359470 | |
pharmgkb | rs80359470 |
gwascentral | rs80359470 |
openSNP | rs80359470 |
23andMe | rs80359470 |
SNPshot | rs80359470 |
SNPdbe | rs80359470 |
MSV3d | rs80359470 |
GWAS Ctlg | rs80359470 |
Max Magnitude | 6 |
rs80359470, also known as 5104delAA, c.4876_4877delAA and p.Asn1626Serfs, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80359470(-;-) |
Alt | rs80359470(-;-) |
Reference | Rs80359470(AA;AA) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome not provided |
Variation | info |
Gene | BRCA2 |
CLNDBN | Breast-ovarian cancer, familial 2 Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome not provided |
Reversed | 0 |
HGVS | NC_000013.10:g.32913368_32913369delAA |
CLNSRC | Breast Cancer Information Core (BRCA2) |
CLNACC | RCV000031510.9, RCV000044510.6, RCV000131079.3, RCV000160293.3, |