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rs8049439

From SNPedia

Orientationplus
Stabilizedplus
Make rs8049439(C;C)
Make rs8049439(C;T)
Make rs8049439(T;T)
ReferenceGRCh38 38.1/141
Chromosome16
Position28826194
GeneATXN2L
is asnp
is mentioned by
dbSNPrs8049439
ebirs8049439
HLIrs8049439
Exacrs8049439
Varsomers8049439
Maprs8049439
PheGenIrs8049439
hapmaprs8049439
1000 genomesrs8049439
hgdprs8049439
ensemblrs8049439
gopubmedrs8049439
geneviewrs8049439
scholarrs8049439
googlers8049439
pharmgkbrs8049439
gwascentralrs8049439
openSNPrs8049439
23andMers8049439
23andMe allrs8049439
SNP Nexus

SNPshotrs8049439
SNPdbers8049439
MSV3drs8049439
GWAS Ctlgrs8049439
GMAF0.3581
Max Magnitude
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 19915574OA-icon.png]
Trait Inflammatory bowel disease (early onset)
Title Common variants at five new loci associated with early-onset inflammatory bowel disease
Risk Allele G
P-val 2E-9
Odds Ratio 1.14 [1.00-1.30]


[PMID 20473688] Association between genome-wide association studies reported SNPs and pediatric-onset Crohn's disease in Canadian children

OMIM606668
Desc
Variant
Relatedalso
[PMID 19478790OA-icon.png] The role of obesity-associated loci identified in genome-wide association studies in the determination of pediatric BMI.


GET Evidence
rs8049439
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.407046
summary



GWAS snp
PMID [PMID 23722424OA-icon.png]
Trait Educational attainment
Title GWAS of 126,559 individuals identifies genetic variants associated with educational attainment.
Risk Allele T
P-val 1E-7
Odds Ratio .09 [NR] unit increase