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rs9533090

From SNPedia

Orientationplus
Stabilizedplus
Make rs9533090(C;C)
Make rs9533090(C;T)
Make rs9533090(T;T)
ReferenceGRCh38 38.1/141
Chromosome13
Position42377313
is asnp
is mentioned by
dbSNPrs9533090
ebirs9533090
HLIrs9533090
Exacrs9533090
Varsomers9533090
Maprs9533090
PheGenIrs9533090
hapmaprs9533090
1000 genomesrs9533090
hgdprs9533090
ensemblrs9533090
gopubmedrs9533090
geneviewrs9533090
scholarrs9533090
googlers9533090
pharmgkbrs9533090
gwascentralrs9533090
openSNPrs9533090
23andMers9533090
23andMe allrs9533090
SNP Nexus

SNPshotrs9533090
SNPdbers9533090
MSV3drs9533090
GWAS Ctlgrs9533090
GMAF0.3177
Max Magnitude
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 19801982OA-icon.png]
Trait Bone mineral density (spine)
Title Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies
Risk Allele T
P-val 5E-25
Odds Ratio 0.12 [0.10-0.14] sd decrease


OMIM612110
Desc
Variant
Relatedalso
[PMID 22370887OA-icon.png] Are bone mineral density loci associated with hip osteoporotic fractures? A validation study on previously reported genome-wide association loci in a Chinese population
GWAS snp
PMID [PMID 22504420OA-icon.png]
Trait
Title Genome-wide meta-analysis identifies 56 bone mineral density loci and reveals 14 loci associated with risk of fracture.
Risk Allele T
P-val 5E-68
Odds Ratio 0.1000 None
GET Evidence
rs9533090
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.28125
summary



GWAS snp
PMID [PMID 24249740OA-icon.png]
Trait Bone mineral density
Title Multistage genome-wide association meta-analyses identified two new loci for bone mineral density.
Risk Allele
P-val 3E-7
Odds Ratio NR NR