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rs9653442

From SNPedia

Orientationplus
Stabilizedplus
Make rs9653442(C;C)
Make rs9653442(C;T)
Make rs9653442(T;T)
ReferenceGRCh38 38.1/141
Chromosome2
Position100208905
GeneADSSL1
is asnp
is mentioned by
dbSNPrs9653442
ebirs9653442
HLIrs9653442
Exacrs9653442
Varsomers9653442
Maprs9653442
PheGenIrs9653442
hapmaprs9653442
1000 genomesrs9653442
hgdprs9653442
ensemblrs9653442
gopubmedrs9653442
geneviewrs9653442
scholarrs9653442
googlers9653442
pharmgkbrs9653442
gwascentralrs9653442
openSNPrs9653442
23andMers9653442
23andMe allrs9653442
SNP Nexus

SNPshotrs9653442
SNPdbers9653442
MSV3drs9653442
GWAS Ctlgrs9653442
GMAF0.4637
Max Magnitude
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 17554260OA-icon.png]
Trait Type 1 diabetes
Title Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes
Risk Allele G
P-val 0.0000050000000000000004
Odds Ratio 1.11 [1.05-1.17]


[PMID 19140132OA-icon.png] Unbiased estimation of odds ratios: combining genomewide association scans with replication studies.


[PMID 19359276OA-icon.png] Identification of AF4/FMR2 family, member 3 (AFF3) as a novel rheumatoid arthritis susceptibility locus and confirmation of two further pan-autoimmune susceptibility genes.


[PMID 19639606OA-icon.png] Correcting "winner's curse" in odds ratios from genomewide association findings for major complex human diseases.


[PMID 20072139OA-icon.png] Association of the AFF3 gene and IL2/IL21 gene region with juvenile idiopathic arthritis.


GET Evidence
rs9653442
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.390625
summary



GWAS snp
PMID [PMID 24390342OA-icon.png]
Trait Rheumatoid arthritis
Title Genetics of rheumatoid arthritis contributes to biology and drug discovery.
Risk Allele C
P-val 2E-18
Odds Ratio 1.11 [1.09-1.14]