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rs9854612

From SNPedia

Orientationplus
Stabilizedplus
Make rs9854612(A;A)
Make rs9854612(A;G)
Make rs9854612(G;G)
ReferenceGRCh38 38.1/141
Chromosome3
Position128538371
GeneTMED10P2
is asnp
is mentioned by
dbSNPrs9854612
ebirs9854612
HLIrs9854612
Exacrs9854612
Varsomers9854612
Maprs9854612
PheGenIrs9854612
hapmaprs9854612
1000 genomesrs9854612
hgdprs9854612
ensemblrs9854612
gopubmedrs9854612
geneviewrs9854612
scholarrs9854612
googlers9854612
pharmgkbrs9854612
gwascentralrs9854612
openSNPrs9854612
23andMers9854612
23andMe allrs9854612
SNP Nexus

SNPshotrs9854612
SNPdbers9854612
MSV3drs9854612
GWAS Ctlgrs9854612
Max Magnitude
? (A;A) (A;G) (G;G) 28
Strongest association with combined capacities for music perception (pitch, duration, sound patterns) found in study of 767 Finnish individuals belonging in 76 families [PMID 24614497OA-icon.png], involved in musical aptitude. Posterior probability of LD 98%.

This region is located a few dozen kilobases upstream of the GATA binding protein 2 GATA2 gene. GATA2 regulates the development of cochlear hair cells and the inferior colliculus (IC), which are important in tonotopic mapping. SNP is surrounded by known regulatory regions, and may itself be in one.

Publications[edit]

[PMID 24614497OA-icon.png] A genome-wide linkage and association study of musical aptitude identifies loci containing genes related to inner ear development and neurocognitive functions.