rs1052030
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(T;T) | 0 | common in clinvar |
Make rs1052030(C;C) |
Make rs1052030(C;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 11 |
Position | 77142737 |
Gene | MYO7A |
is a | snp |
is | mentioned by |
dbSNP | rs1052030 |
dbSNP (classic) | rs1052030 |
ClinGen | rs1052030 |
ebi | rs1052030 |
HLI | rs1052030 |
Exac | rs1052030 |
Gnomad | rs1052030 |
Varsome | rs1052030 |
LitVar | rs1052030 |
Map | rs1052030 |
PheGenI | rs1052030 |
Biobank | rs1052030 |
1000 genomes | rs1052030 |
hgdp | rs1052030 |
ensembl | rs1052030 |
geneview | rs1052030 |
scholar | rs1052030 |
rs1052030 | |
pharmgkb | rs1052030 |
gwascentral | rs1052030 |
openSNP | rs1052030 |
23andMe | rs1052030 |
SNPshot | rs1052030 |
SNPdbe | rs1052030 |
MSV3d | rs1052030 |
GWAS Ctlg | rs1052030 |
GMAF | 0.4853 |
Max Magnitude | 0 |
aka c.47T>C (p.Leu16Ser) and also c.47T>A (p.Leu16Ter); the former is benign, while the latter is pathogenic for a recessive form of deafness (type 2, Usher syndrome)
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
ClinVar | |
---|---|
Risk | rs1052030(A;A) rs1052030(C;C) |
Alt | rs1052030(A;A) rs1052030(C;C) |
Reference | Rs1052030(T;T) |
Significance | Probable-non-pathogenic |
Disease | not specified not provided Nonsyndromic Hearing Loss Retinitis pigmentosa-deafness syndrome Nonsyndromic Hearing Loss |
Variation | info |
Gene | MYO7A |
CLNDBN | not specified not provided Nonsyndromic Hearing Loss, Dominant Retinitis pigmentosa-deafness syndrome Nonsyndromic Hearing Loss, Recessive |
Reversed | 0 |
HGVS | NC_000011.9:g.76853783T>C |
CLNSRC | UniProtKB (protein) |
CLNACC | RCV000036163.4, RCV000132571.1, RCV000261128.1, RCV000318604.1, RCV000353260.1, |
[PMID 18776599] Susceptibility genes for gentamicin-induced vestibular dysfunction.
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 11
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Affy500k
- On chip Ancestry v2
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d