rs10985112
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common in complete genomics |
Make rs10985112(A;A) |
Make rs10985112(A;G) |
Reference | GRCh38 38.1/141 |
Chromosome | 9 |
Position | 120969130 |
Gene | C5 |
is a | snp |
is | mentioned by |
dbSNP | rs10985112 |
dbSNP (classic) | rs10985112 |
ClinGen | rs10985112 |
ebi | rs10985112 |
HLI | rs10985112 |
Exac | rs10985112 |
Gnomad | rs10985112 |
Varsome | rs10985112 |
LitVar | rs10985112 |
Map | rs10985112 |
PheGenI | rs10985112 |
Biobank | rs10985112 |
1000 genomes | rs10985112 |
hgdp | rs10985112 |
ensembl | rs10985112 |
geneview | rs10985112 |
scholar | rs10985112 |
rs10985112 | |
pharmgkb | rs10985112 |
gwascentral | rs10985112 |
openSNP | rs10985112 |
23andMe | rs10985112 |
SNPshot | rs10985112 |
SNPdbe | rs10985112 |
MSV3d | rs10985112 |
GWAS Ctlg | rs10985112 |
GMAF | 0.1552 |
Max Magnitude | 0 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
Rs10985112 | |
---|---|
PubMed | [PMID 17880261] |
Affy Probeset | SNP_A-4241423 |
Affy Orientation | same |
On GW 5.0 | 1 |
Alleles A/B | A/G |
Ancestral | A |
Population | Caucasian |
Allele | A |
Case Freq. | 0.1 |
Control Freq. | 0.07 |
Odds Ratio Het | |
Odds Ratio Hom | |
Odds Ratio All | 1.57 |
Disease | Rheumatoid Arthritis (RA) |
rs10985112 increases susceptibility to Rheumatoid Arthritis 1.57 times for carriers of the A allele [PMID 17880261]
[PMID 20018075] Genome-wide association study of rheumatoid arthritis by a score test based on wavelet transformation.
ClinVar | |
---|---|
Risk | rs10985112(A;A) |
Alt | rs10985112(A;A) |
Reference | Rs10985112(G;G) |
Significance | Non-pathogenic |
Disease | not specified |
Variation | info |
Gene | C5 |
CLNDBN | not specified |
Reversed | 0 |
HGVS | NC_000009.11:g.123731408G>A |
CLNSRC | |
CLNACC | RCV000456091.1, |
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 9
- Has genotype
- Has population
- Has Report GE
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Affy500k
- On chip Ancestry v2
- On chip FTDNA2
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d