rs121918004
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | normal |
(A;C) | 3 | carrier of a hypophosphatasia allele |
(C;C) | 4 | hypophosphatasia |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 21564188 |
Gene | ALPL |
is a | snp |
is | mentioned by |
dbSNP | rs121918004 |
dbSNP (classic) | rs121918004 |
ClinGen | rs121918004 |
ebi | rs121918004 |
HLI | rs121918004 |
Exac | rs121918004 |
Gnomad | rs121918004 |
Varsome | rs121918004 |
LitVar | rs121918004 |
Map | rs121918004 |
PheGenI | rs121918004 |
Biobank | rs121918004 |
1000 genomes | rs121918004 |
hgdp | rs121918004 |
ensembl | rs121918004 |
geneview | rs121918004 |
scholar | rs121918004 |
rs121918004 | |
pharmgkb | rs121918004 |
gwascentral | rs121918004 |
openSNP | rs121918004 |
23andMe | rs121918004 |
SNPshot | rs121918004 |
SNPdbe | rs121918004 |
MSV3d | rs121918004 |
GWAS Ctlg | rs121918004 |
Max Magnitude | 4 |
rs121918004, also known as c.620A>C or p.Q207P, is a SNP in the ALPL gene on chromosome 1.
Based on the ALPL gene mutations database, the rare/minor allele is considered pathogenic for the perinatal form of hypophosphatasia.
This SNP is referred to as i5002771 by 23andMe.
ClinVar | |
---|---|
Risk | Rs121918004(C;C) |
Alt | Rs121918004(C;C) |
Reference | Rs121918004(A;A) |
Significance | Pathogenic |
Disease | Infantile hypophosphatasia not provided |
Variation | info |
Gene | ALPL |
CLNDBN | Infantile hypophosphatasia not provided |
Reversed | 0 |
HGVS | NC_000001.10:g.21890681A>C |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000014654.20, RCV000224906.1, |