rs12476364
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 6 | Lynch syndrome, pathogenic mutation |
(C;G) | 6 | Lynch syndrome, pathogenic mutation |
(G;G) | 0 | common in clinvar |
(G;T) | 6 | Lynch syndrome |
Make rs12476364(A;A) |
Reference | GRCh38 38.1/141 |
Chromosome | 2 |
Position | 47416295 |
Gene | MSH2 |
is a | snp |
is | mentioned by |
dbSNP | rs12476364 |
dbSNP (classic) | rs12476364 |
ClinGen | rs12476364 |
ebi | rs12476364 |
HLI | rs12476364 |
Exac | rs12476364 |
Gnomad | rs12476364 |
Varsome | rs12476364 |
LitVar | rs12476364 |
Map | rs12476364 |
PheGenI | rs12476364 |
Biobank | rs12476364 |
1000 genomes | rs12476364 |
hgdp | rs12476364 |
ensembl | rs12476364 |
geneview | rs12476364 |
scholar | rs12476364 |
rs12476364 | |
pharmgkb | rs12476364 |
gwascentral | rs12476364 |
openSNP | rs12476364 |
23andMe | rs12476364 |
SNPshot | rs12476364 |
SNPdbe | rs12476364 |
MSV3d | rs12476364 |
GWAS Ctlg | rs12476364 |
Max Magnitude | 6 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
ClinVar | |
---|---|
Risk | rs12476364(A;A) rs12476364(C;C) rs12476364(T;T) |
Alt | rs12476364(A;A) rs12476364(C;C) rs12476364(T;T) |
Reference | Rs12476364(G;G) |
Significance | Pathogenic |
Disease | Lynch syndrome Hereditary cancer-predisposing syndrome |
Variation | info |
Gene | MSH2 |
CLNDBN | Lynch syndrome Hereditary cancer-predisposing syndrome |
Reversed | 0 |
HGVS | NC_000002.11:g.47643434G>A; NC_000002.11:g.47643434G>C; NC_000002.11:g.47643434G>T |
CLNSRC | International Society for Gastrointestinal Hereditary Tumours |
CLNACC | RCV000076757.2, RCV000076758.2, RCV000491758.1, RCV000468897.1, RCV000491423.1, |