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rs12476364

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(A;G) 6 Lynch syndrome, pathogenic mutation
(C;G) 6 Lynch syndrome, pathogenic mutation
(G;G) 0 common in clinvar
(G;T) 6 Lynch syndrome


Make rs12476364(A;A)
ReferenceGRCh38 38.1/141
Chromosome2
Position47416295
GeneMSH2
is asnp
is mentioned by
dbSNPrs12476364
dbSNP (classic)rs12476364
ClinGenrs12476364
ebirs12476364
HLIrs12476364
Exacrs12476364
Gnomadrs12476364
Varsomers12476364
LitVarrs12476364
Maprs12476364
PheGenIrs12476364
Biobankrs12476364
1000 genomesrs12476364
hgdprs12476364
ensemblrs12476364
geneviewrs12476364
scholarrs12476364
googlers12476364
pharmgkbrs12476364
gwascentralrs12476364
openSNPrs12476364
23andMers12476364
SNPshotrs12476364
SNPdbers12476364
MSV3drs12476364
GWAS Ctlgrs12476364
Max Magnitude6
? (A;A) (A;G) (G;G) 28


ClinVar
Risk rs12476364(A;A) rs12476364(C;C) rs12476364(T;T)
Alt rs12476364(A;A) rs12476364(C;C) rs12476364(T;T)
Reference Rs12476364(G;G)
Significance Pathogenic
Disease Lynch syndrome Hereditary cancer-predisposing syndrome
Variation info
Gene MSH2
CLNDBN Lynch syndrome Hereditary cancer-predisposing syndrome
Reversed 0
HGVS NC_000002.11:g.47643434G>A; NC_000002.11:g.47643434G>C; NC_000002.11:g.47643434G>T
CLNSRC International Society for Gastrointestinal Hereditary Tumours
CLNACC RCV000076757.2, RCV000076758.2, RCV000491758.1, RCV000468897.1, RCV000491423.1,