rs12686004
From SNPedia
Orientation | plus |
Stabilized | plus |
Make rs12686004(A;A) |
Make rs12686004(A;G) |
Make rs12686004(G;G) |
Reference | GRCh38 38.1/141 |
Chromosome | 9 |
Position | 104891145 |
Gene | ABCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs12686004 |
dbSNP (classic) | rs12686004 |
ClinGen | rs12686004 |
ebi | rs12686004 |
HLI | rs12686004 |
Exac | rs12686004 |
Gnomad | rs12686004 |
Varsome | rs12686004 |
LitVar | rs12686004 |
Map | rs12686004 |
PheGenI | rs12686004 |
Biobank | rs12686004 |
1000 genomes | rs12686004 |
hgdp | rs12686004 |
ensembl | rs12686004 |
geneview | rs12686004 |
scholar | rs12686004 |
rs12686004 | |
pharmgkb | rs12686004 |
gwascentral | rs12686004 |
openSNP | rs12686004 |
23andMe | rs12686004 |
SNPshot | rs12686004 |
SNPdbe | rs12686004 |
MSV3d | rs12686004 |
GWAS Ctlg | rs12686004 |
GMAF | 0.118 |
Max Magnitude | 0 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 21909109] |
Trait | |
Title | Large-scale genome-wide association studies in East Asians identify new genetic loci influencing metabolic traits. |
Risk Allele | T |
P-val | 2E-18 |
Odds Ratio | 0.0217 [0.017-0.027] mg/dL decrease |
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 9
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d