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rs12734338

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(C;T) 1 Gender=Male (if data is from a DNA chip)
(T;T) 1 Gender=Female (if data is from a DNA chip)


Make rs12734338(C;C)
ReferenceGRCh38 38.1/141
Chromosome1
Position202500595
GenePPP1R12B
is asnp
is mentioned by
dbSNPrs12734338
dbSNP (classic)rs12734338
ClinGenrs12734338
ebirs12734338
HLIrs12734338
Exacrs12734338
Gnomadrs12734338
Varsomers12734338
LitVarrs12734338
Maprs12734338
PheGenIrs12734338
Biobankrs12734338
1000 genomesrs12734338
hgdprs12734338
ensemblrs12734338
geneviewrs12734338
scholarrs12734338
googlers12734338
pharmgkbrs12734338
gwascentralrs12734338
openSNPrs12734338
23andMers12734338
SNPshotrs12734338
SNPdbers12734338
MSV3drs12734338
GWAS Ctlgrs12734338
Max Magnitude1

Due to homology between a region on the Y chromosome and chromosome 1, a genotyping test for rs12734338 will return a result of (C;T) when males are tested and a result of (T;T) when females are tested.[PMID 20018050OA-icon.png],[PMID 22362730OA-icon.png]

? (C;C) (C;T) (T;T) 28


GWAS snp
PMID [PMID 24778558OA-icon.png]
Trait Coronary heart disease
Title RTN4 and FBXL17 Genes are Associated with Coronary Heart Disease in Genome-Wide Association Analysis of Lithuanian Families.
Risk Allele G
P-val 3E-7
Odds Ratio 29.00 [3.95-212.9]
GWAS snp
PMID [PMID 23936387OA-icon.png]
Trait Celiac disease
Title A possible mechanism behind autoimmune disorders discovered by genome-wide linkage and association analysis in celiac disease.
Risk Allele C
P-val 3E-7
Odds Ratio NR NR