rs138837292
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 6 | Friedreich's ataxia |
(-;G) | 3 | carrier of a Friedreich's ataxia allele |
(G;G) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 9 |
Position | 69035882 |
Gene | FXN |
is a | snp |
is | mentioned by |
dbSNP | rs138837292 |
dbSNP (classic) | rs138837292 |
ClinGen | rs138837292 |
ebi | rs138837292 |
HLI | rs138837292 |
Exac | rs138837292 |
Gnomad | rs138837292 |
Varsome | rs138837292 |
LitVar | rs138837292 |
Map | rs138837292 |
PheGenI | rs138837292 |
Biobank | rs138837292 |
1000 genomes | rs138837292 |
hgdp | rs138837292 |
ensembl | rs138837292 |
geneview | rs138837292 |
scholar | rs138837292 |
rs138837292 | |
pharmgkb | rs138837292 |
gwascentral | rs138837292 |
openSNP | rs138837292 |
23andMe | rs138837292 |
SNPshot | rs138837292 |
SNPdbe | rs138837292 |
MSV3d | rs138837292 |
GWAS Ctlg | rs138837292 |
Max Magnitude | 6 |
rs138837292, also known as c.100 delG or p.A34PfsX42, is a mutation in the FXN gene on chromosome 9.
The minor allele of this SNP is associated with Friedreich's ataxia when inherited in two copies or as a compound heterozygote.
ClinVar | |
---|---|
Risk | |
Alt | |
Reference | Rs138837292(G;G) |
Significance | Pathogenic |
Disease | Friedreich ataxia 1 |
Variation | info |
Gene | FXN |
CLNDBN | Friedreich ataxia 1 |
Reversed | 0 |
HGVS | NC_000009.11:g.71650798delG |
CLNSRC | |
CLNACC |
[PMID 9339708] Very late onset Friedreich's ataxia without cardiomyopathy is associated with limited GAA expansion in the X25 gene.