rs144104124
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 6 | Friedreich's ataxia |
(G;T) | 3 | carrier of a Friedreich's ataxia allele |
(T;T) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 9 |
Position | 69072722 |
Gene | FXN |
is a | snp |
is | mentioned by |
dbSNP | rs144104124 |
dbSNP (classic) | rs144104124 |
ClinGen | rs144104124 |
ebi | rs144104124 |
HLI | rs144104124 |
Exac | rs144104124 |
Gnomad | rs144104124 |
Varsome | rs144104124 |
LitVar | rs144104124 |
Map | rs144104124 |
PheGenI | rs144104124 |
Biobank | rs144104124 |
1000 genomes | rs144104124 |
hgdp | rs144104124 |
ensembl | rs144104124 |
geneview | rs144104124 |
scholar | rs144104124 |
rs144104124 | |
pharmgkb | rs144104124 |
gwascentral | rs144104124 |
openSNP | rs144104124 |
23andMe | rs144104124 |
SNPshot | rs144104124 |
SNPdbe | rs144104124 |
MSV3d | rs144104124 |
GWAS Ctlg | rs144104124 |
Max Magnitude | 6 |
rs144104124, also known as c.593 T>G or p.L198R, is a mutation in the FXN gene on chromosome 9.
The minor allele of this SNP is associated with Friedreich's ataxia when inherited in two copies or as a compound heterozygote.
ClinVar | |
---|---|
Risk | Rs144104124(G;G) |
Alt | Rs144104124(G;G) |
Reference | Rs144104124(T;T) |
Significance | Pathogenic |
Disease | Friedreich ataxia 1 |
Variation | info |
Gene | FXN |
CLNDBN | Friedreich ataxia 1 |
Reversed | 0 |
HGVS | NC_000009.11:g.71687638T>G |
CLNSRC | |
CLNACC |
[PMID 10874325] A novel missense mutation (L198R) in the Friedreich's ataxia gene.