rs145045861
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 6 | Friedreich's ataxia |
(-;T) | 3 | carrier of a Friedreich's ataxia allele |
(T;T) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 9 |
Position | 69053193 |
Gene | FXN |
is a | snp |
is | mentioned by |
dbSNP | rs145045861 |
dbSNP (classic) | rs145045861 |
ClinGen | rs145045861 |
ebi | rs145045861 |
HLI | rs145045861 |
Exac | rs145045861 |
Gnomad | rs145045861 |
Varsome | rs145045861 |
LitVar | rs145045861 |
Map | rs145045861 |
PheGenI | rs145045861 |
Biobank | rs145045861 |
1000 genomes | rs145045861 |
hgdp | rs145045861 |
ensembl | rs145045861 |
geneview | rs145045861 |
scholar | rs145045861 |
rs145045861 | |
pharmgkb | rs145045861 |
gwascentral | rs145045861 |
openSNP | rs145045861 |
23andMe | rs145045861 |
SNPshot | rs145045861 |
SNPdbe | rs145045861 |
MSV3d | rs145045861 |
GWAS Ctlg | rs145045861 |
Max Magnitude | 6 |
rs145045861, also known as c.317 delT or p.L106X, is a mutation in the FXN gene on chromosome 9.
The minor allele of this SNP is associated with Friedreich's ataxia when inherited in two copies or as a compound heterozygote.
ClinVar | |
---|---|
Risk | |
Alt | |
Reference | Rs145045861(T;T) |
Significance | Pathogenic |
Disease | Friedreich ataxia 1 |
Variation | info |
Gene | FXN |
CLNDBN | Friedreich ataxia 1 |
Reversed | 0 |
HGVS | NC_000009.11:g.71668109delT |
CLNSRC | |
CLNACC |
[PMID 10633132] Prevalence of mitochondrial gene mutations among hearing impaired patients.