rs145787161
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 5 | Familial Hypercholesterolemia |
(C;G) | 5 | Familial Hypercholesterolemia |
(G;G) | 0 | common in clinvar |
(G;T) | 5 | Familial Hypercholesterolemia |
Make rs145787161(A;A) |
Reference | GRCh38 38.1/142 |
Chromosome | 19 |
Position | 11120523 |
Gene | LDLR |
is a | snp |
is | mentioned by |
dbSNP | rs145787161 |
dbSNP (classic) | rs145787161 |
ClinGen | rs145787161 |
ebi | rs145787161 |
HLI | rs145787161 |
Exac | rs145787161 |
Gnomad | rs145787161 |
Varsome | rs145787161 |
LitVar | rs145787161 |
Map | rs145787161 |
PheGenI | rs145787161 |
Biobank | rs145787161 |
1000 genomes | rs145787161 |
hgdp | rs145787161 |
ensembl | rs145787161 |
geneview | rs145787161 |
scholar | rs145787161 |
rs145787161 | |
pharmgkb | rs145787161 |
gwascentral | rs145787161 |
openSNP | rs145787161 |
23andMe | rs145787161 |
SNPshot | rs145787161 |
SNPdbe | rs145787161 |
MSV3d | rs145787161 |
GWAS Ctlg | rs145787161 |
Max Magnitude | 5 |
aka c.2140+1G>A
reported in ClinVar as pathogenic for familial hypercholesterolemia and therefore increased risk for coronary artery disease
ClinVar | |
---|---|
Risk | rs145787161(A;A) rs145787161(C;C) rs145787161(T;T) |
Alt | rs145787161(A;A) rs145787161(C;C) rs145787161(T;T) |
Reference | Rs145787161(G;G) |
Significance | Other |
Disease | Familial hypercholesterolemia |
Variation | info |
Gene | LDLR |
CLNDBN | Familial hypercholesterolemia |
Reversed | 0 |
HGVS | NC_000019.9:g.11231199G>A; NC_000019.9:g.11231199G>C; NC_000019.9:g.11231199G>T |
CLNSRC | LDLR @ LOVD OMIM Allelic Variant |
CLNACC | RCV000003942.6, RCV000238288.1, RCV000237339.1, |