rs151206121
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 6 | Friedreich's ataxia |
(-;TGGG) | 3 | carrier of a Friedreich's ataxia allele |
(TGGG;TGGG) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 9 |
Position | 69053257 |
Gene | FXN |
is a | snp |
is | mentioned by |
dbSNP | rs151206121 |
dbSNP (classic) | rs151206121 |
ClinGen | rs151206121 |
ebi | rs151206121 |
HLI | rs151206121 |
Exac | rs151206121 |
Gnomad | rs151206121 |
Varsome | rs151206121 |
LitVar | rs151206121 |
Map | rs151206121 |
PheGenI | rs151206121 |
Biobank | rs151206121 |
1000 genomes | rs151206121 |
hgdp | rs151206121 |
ensembl | rs151206121 |
geneview | rs151206121 |
scholar | rs151206121 |
rs151206121 | |
pharmgkb | rs151206121 |
gwascentral | rs151206121 |
openSNP | rs151206121 |
23andMe | rs151206121 |
SNPshot | rs151206121 |
SNPdbe | rs151206121 |
MSV3d | rs151206121 |
GWAS Ctlg | rs151206121 |
Max Magnitude | 6 |
rs151206121, also known as c.381_384 delTGGG_+_c.384_+_1__+_9 delGTACCTCTT or , is a mutation in the FXN gene on chromosome 9.
The deletion is associated with Friedreich's ataxia when inherited in two copies or as a compound heterozygote.
ClinVar | |
---|---|
Risk | |
Alt | |
Reference | Rs151206121(TGGG;TGGG) |
Significance | Pathogenic |
Disease | Friedreich ataxia 1 |
Variation | info |
Gene | FXN |
CLNDBN | Friedreich ataxia 1 |
Reversed | 0 |
HGVS | NC_000009.11:g.71668173_71668176delTGGG |
CLNSRC | |
CLNACC |
[PMID 9339708] Very late onset Friedreich's ataxia without cardiomyopathy is associated with limited GAA expansion in the X25 gene.