rs173686
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;G) | ||
(T;T) | 0 |
Make rs173686(C;C) |
Make rs173686(C;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 5 |
Position | 83515681 |
Gene | VCAN |
is a | snp |
is | mentioned by |
dbSNP | rs173686 |
dbSNP (classic) | rs173686 |
ClinGen | rs173686 |
ebi | rs173686 |
HLI | rs173686 |
Exac | rs173686 |
Gnomad | rs173686 |
Varsome | rs173686 |
LitVar | rs173686 |
Map | rs173686 |
PheGenI | rs173686 |
Biobank | rs173686 |
1000 genomes | rs173686 |
hgdp | rs173686 |
ensembl | rs173686 |
geneview | rs173686 |
scholar | rs173686 |
rs173686 | |
pharmgkb | rs173686 |
gwascentral | rs173686 |
openSNP | rs173686 |
23andMe | rs173686 |
SNPshot | rs173686 |
SNPdbe | rs173686 |
MSV3d | rs173686 |
GWAS Ctlg | rs173686 |
GMAF | 0.3416 |
Max Magnitude | 0 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
The presence of an rs173686(C) allele has been linked to increased risk of a certain type of stroke, Intracranial Aneurysm, in a population of Dutch adults. [PMID 16917090]
A study of 240 Chinese Han nationality patients with at least one intracranial aneurysm and matched controls did not replicate this result.[PMID 18484070]
Note: the dbSNP sequence entry for this SNP represents the noncoding strand, and is thus the reverse complement compared to the SNP as referred to in [PMID 16917090].
[PMID 30121816] Genetic Risk Factors for Intracranial Aneurysm in the Kazakh Population.
[PMID 31970092] The Association between Genes Polymorphisms of Heparan Sulfate Proteoglycan 2 (HSPG2) and Chondroitin Sulfate Proteoglycan 2 (CSPG2) and Intracranial Aneurysm Susceptibility: A Meta-Analysis.
- Is a snp
- In dbSNP
- SNPs on chromosome 5
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip 23andMe v5
- On chip Affy GenomeWide 6
- On chip Ancestry v2c
- On chip Ancestry v2d
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M