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rs173686

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(A;G)
(T;T) 0
Make rs173686(C;C)
Make rs173686(C;T)
ReferenceGRCh38 38.1/141
Chromosome5
Position83515681
GeneVCAN
is asnp
is mentioned by
dbSNPrs173686
dbSNP (classic)rs173686
ClinGenrs173686
ebirs173686
HLIrs173686
Exacrs173686
Gnomadrs173686
Varsomers173686
LitVarrs173686
Maprs173686
PheGenIrs173686
Biobankrs173686
1000 genomesrs173686
hgdprs173686
ensemblrs173686
geneviewrs173686
scholarrs173686
googlers173686
pharmgkbrs173686
gwascentralrs173686
openSNPrs173686
23andMers173686
SNPshotrs173686
SNPdbers173686
MSV3drs173686
GWAS Ctlgrs173686
GMAF0.3416
Max Magnitude0
? (C;C) (C;T) (T;T) 28


The presence of an rs173686(C) allele has been linked to increased risk of a certain type of stroke, Intracranial Aneurysm, in a population of Dutch adults. [PMID 16917090]

A study of 240 Chinese Han nationality patients with at least one intracranial aneurysm and matched controls did not replicate this result.[PMID 18484070]

Note: the dbSNP sequence entry for this SNP represents the noncoding strand, and is thus the reverse complement compared to the SNP as referred to in [PMID 16917090].


[PMID 30121816] Genetic Risk Factors for Intracranial Aneurysm in the Kazakh Population.


[PMID 31970092OA-icon.png] The Association between Genes Polymorphisms of Heparan Sulfate Proteoglycan 2 (HSPG2) and Chondroitin Sulfate Proteoglycan 2 (CSPG2) and Intracranial Aneurysm Susceptibility: A Meta-Analysis.