rs1801262
From SNPedia
Orientation | minus |
Stabilized | minus |
Make rs1801262(A;A) |
Make rs1801262(A;G) |
Make rs1801262(G;G) |
Reference | GRCh38 38.1/142 |
Chromosome | 2 |
Position | 181678728 |
Gene | NEUROD1 |
is a | snp |
is | mentioned by |
dbSNP | rs1801262 |
dbSNP (classic) | rs1801262 |
ClinGen | rs1801262 |
ebi | rs1801262 |
HLI | rs1801262 |
Exac | rs1801262 |
Gnomad | rs1801262 |
Varsome | rs1801262 |
LitVar | rs1801262 |
Map | rs1801262 |
PheGenI | rs1801262 |
Biobank | rs1801262 |
1000 genomes | rs1801262 |
hgdp | rs1801262 |
ensembl | rs1801262 |
geneview | rs1801262 |
scholar | rs1801262 |
rs1801262 | |
pharmgkb | rs1801262 |
gwascentral | rs1801262 |
openSNP | rs1801262 |
23andMe | rs1801262 |
SNPshot | rs1801262 |
SNPdbe | rs1801262 |
MSV3d | rs1801262 |
GWAS Ctlg | rs1801262 |
GMAF | 0.2658 |
Max Magnitude | 0 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
Rs1801262 | |
---|---|
PubMed | [PMID 17192490] |
Affy Probeset | SNP_A-2314121 |
Affy Orientation | same |
On GW 5.0 | 1 |
Alleles A/B | A/G |
Ancestral | G |
Population | NEU(Finnland) |
Allele | A |
Case Freq. | 0.37 |
Control Freq. | 0.34 |
Odds Ratio Het | |
Odds Ratio Hom | |
Odds Ratio All | 1.15 |
Disease | Type II Diabetes (T2D) |
rs1801262 increases susceptibility to Type II Diabetes 1.15 times for carriers of the A allele [PMID 17192490]
[PMID 14681825] Mutation of CERKL, a novel human ceramide kinase gene, causes autosomal recessive retinitis pigmentosa (RP26).
[PMID 16909454] NeuroD1 gene and interleukin-18 gene polymorphisms in type 1 diabetes in Dalmatian population of Southern Croatia.
[PMID 20416077] Identification of type 2 diabetes-associated combination of SNPs using support vector machine.
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 2
- Has genotype
- Has population
- Has Report GE
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Affy500k
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d