rs1801552
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (T;T) | 0 | common in clinvar |
| Make rs1801552(C;C) |
| Make rs1801552(C;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 16 |
| Position | 68823538 |
| Gene | CDH1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1801552 |
| dbSNP (classic) | rs1801552 |
| ClinGen | rs1801552 |
| ebi | rs1801552 |
| HLI | rs1801552 |
| Exac | rs1801552 |
| Gnomad | rs1801552 |
| Varsome | rs1801552 |
| LitVar | rs1801552 |
| Map | rs1801552 |
| PheGenI | rs1801552 |
| Biobank | rs1801552 |
| 1000 genomes | rs1801552 |
| hgdp | rs1801552 |
| ensembl | rs1801552 |
| geneview | rs1801552 |
| scholar | rs1801552 |
| rs1801552 | |
| pharmgkb | rs1801552 |
| gwascentral | rs1801552 |
| openSNP | rs1801552 |
| 23andMe | rs1801552 |
| SNPshot | rs1801552 |
| SNPdbe | rs1801552 |
| MSV3d | rs1801552 |
| GWAS Ctlg | rs1801552 |
| GMAF | 0.3067 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
[PMID 22535324] CDH1 gene polymorphisms, plasma CDH1 levels and risk of gastric cancer in a Chinese population
[PMID 24838934
] Nucleotide variants of the cancer predisposing gene CDH1 and the risk of non-syndromic cleft lip with or without cleft palate
[PMID 25150394] Genetic variation of the E-cadherin gene is associated with primary infertility in patients with ovarian endometriosis
| ClinVar | |
|---|---|
| Risk | rs1801552(C;C) |
| Alt | rs1801552(C;C) |
| Reference | Rs1801552(T;T) |
| Significance | Non-pathogenic |
| Disease | Hereditary cancer-predisposing syndrome not specified Hereditary diffuse gastric cancer |
| Variation | info |
| Gene | CDH1 |
| CLNDBN | Hereditary cancer-predisposing syndrome not specified Hereditary diffuse gastric cancer |
| Reversed | 0 |
| HGVS | NC_000016.9:g.68857441T>C |
| CLNSRC | Ambry Genetics ClinVar |
| CLNACC | RCV000132164.2, RCV000246442.1, RCV000293455.1, |
