rs2266788

minus

Geno	Mag	Summary
(T;T)	0	common on affy axiom data

Make rs2266788(C;C)

Make rs2266788(C;T)

Reference

GRCh38 38.1/141

Chromosome

11

Position

116789970

Gene	APOA5, ZPR1

is a	snp
is	mentioned by
dbSNP	rs2266788
dbSNP (classic)	rs2266788
ClinGen	rs2266788
ebi	rs2266788
HLI	rs2266788
Exac	rs2266788
Gnomad	rs2266788
Varsome	rs2266788
LitVar	rs2266788
Map	rs2266788
PheGenI	rs2266788
Biobank	rs2266788
1000 genomes	rs2266788
hgdp	rs2266788
ensembl	rs2266788
geneview	rs2266788
scholar	rs2266788
google	rs2266788
pharmgkb	rs2266788
gwascentral	rs2266788
openSNP	rs2266788
23andMe	rs2266788
SNPshot	rs2266788
SNPdbe	rs2266788
MSV3d	rs2266788
GWAS Ctlg	rs2266788

GMAF

0.1134

Max Magnitude

0

?

(C;C) (C;T) (T;T)

28

[PMID 19732897] Associations of polymorphisms in the apolipoprotein A1/C3/A4/A5 gene cluster with familial combined hyperlipidaemia in Hong Kong Chinese

[PMID 20395964] Different effects of apolipoprotein A5 SNPs and haplotypes on triglyceride concentration in three ethnic origins

[PMID 20883102] Haplotype analysis of the apolipoprotein A5 gene in obese pediatric patients

GWAS snp
PMID	[PMID 21386085 ]
Trait
Title	A Bivariate Genome-Wide Approach to Metabolic Syndrome: STAMPEED Consortium
Risk Allele	A
P-val	2E-16
Odds Ratio	0.4100 [0.31-0.51] unit increase

[PMID 21375366] Impact of apolipoprotein A5 (APOA5) polymorphisms on serum triglyceride levels in schizophrenic patients under long-term atypical antipsychotic treatment

[PMID 19041386 ] Genetic-epidemiological evidence on genes associated with HDL cholesterol levels: a systematic in-depth review.

[PMID 19197348 ] Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.

[PMID 20452521 ] Triglyceride-mediated pathways and coronary disease: collaborative analysis of 101 studies.

ClinVar
Risk	Rs2266788(T;T)
Alt	Rs2266788(T;T)
Reference	rs2266788(C;C)
Significance	Other
Disease	Hypertriglyceridemia
Variation	info
Gene	ZPR1 APOA5
CLNDBN	Hypertriglyceridemia, susceptibility to
Reversed	1
HGVS	NC_000011.9:g.116660686G>A
CLNSRC	OMIM Allelic Variant
CLNACC	RCV000114996.3,

[PMID 28102463] Marked Differences of Haplotype Tagging SNP Distribution, Linkage, and Haplotype Profile of APOA5 Gene in Roma Population Samples.