rs267606655
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(CC;CC) | 0 | common in clinvar |
(CC;GA) | 5 | Lowered risk (0.6x) of coronary artery disease |
Make rs267606655(GA;GA) |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 62597616 |
Gene | ANGPTL3, DOCK7 |
is a | snp |
is | mentioned by |
dbSNP | rs267606655 |
dbSNP (classic) | rs267606655 |
ClinGen | rs267606655 |
ebi | rs267606655 |
HLI | rs267606655 |
Exac | rs267606655 |
Gnomad | rs267606655 |
Varsome | rs267606655 |
LitVar | rs267606655 |
Map | rs267606655 |
PheGenI | rs267606655 |
Biobank | rs267606655 |
1000 genomes | rs267606655 |
hgdp | rs267606655 |
ensembl | rs267606655 |
geneview | rs267606655 |
scholar | rs267606655 |
rs267606655 | |
pharmgkb | rs267606655 |
gwascentral | rs267606655 |
openSNP | rs267606655 |
23andMe | rs267606655 |
SNPshot | rs267606655 |
SNPdbe | rs267606655 |
MSV3d | rs267606655 |
GWAS Ctlg | rs267606655 |
Max Magnitude | 5 |
rs267606655, also known as c.50_51delCCinsGA and p.Ser17Ter, represents a rare loss of function variant in the ANGPTL3 gene on chromosome 1.
As a loss of function variant, the minor allele leads to lower amounts of ANGPTL3 protein, lowered triglycerides and LDL cholesterol, and according to several studies, a lowered risk (by about 40%) of developing coronary artery disease. These studies are discussed on the ANGPTL3 page.
ClinVar | |
---|---|
Risk | rs267606655(GA;GA) |
Alt | rs267606655(GA;GA) |
Reference | Rs267606655(CC;CC) |
Significance | Pathogenic |
Disease | Hypobetalipoproteinemia |
Variation | info |
Gene | DOCK7 ANGPTL3 |
CLNDBN | Hypobetalipoproteinemia, familial, 2 |
Reversed | 0 |
HGVS | NC_000001.10:g.63063287_63063288delCCinsGA |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000005684.3, |