rs267606962
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common in clinvar |
Make rs267606962(C;C) |
Make rs267606962(C;G) |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 46189539 |
Gene | POMGNT1, TSPAN1 |
is a | snp |
is | mentioned by |
dbSNP | rs267606962 |
dbSNP (classic) | rs267606962 |
ClinGen | rs267606962 |
ebi | rs267606962 |
HLI | rs267606962 |
Exac | rs267606962 |
Gnomad | rs267606962 |
Varsome | rs267606962 |
LitVar | rs267606962 |
Map | rs267606962 |
PheGenI | rs267606962 |
Biobank | rs267606962 |
1000 genomes | rs267606962 |
hgdp | rs267606962 |
ensembl | rs267606962 |
geneview | rs267606962 |
scholar | rs267606962 |
rs267606962 | |
pharmgkb | rs267606962 |
gwascentral | rs267606962 |
openSNP | rs267606962 |
23andMe | rs267606962 |
SNPshot | rs267606962 |
SNPdbe | rs267606962 |
MSV3d | rs267606962 |
GWAS Ctlg | rs267606962 |
Max Magnitude | 0 |
ClinVar | |
---|---|
Risk | rs267606962(A;A) rs267606962(C;C) |
Alt | rs267606962(A;A) rs267606962(C;C) |
Reference | Rs267606962(G;G) |
Significance | Pathogenic |
Disease | Congenital muscular dystrophy-dystroglycanopathy with mental retardation Muscle eye brain disease |
Variation | info |
Gene | POMGNT1 |
CLNDBN | Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B3 Muscle eye brain disease |
Reversed | 1 |
HGVS | NC_000001.10:g.46655211C>G; NC_000001.10:g.46655211C>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000004205.4, RCV000050002.2, |
[PMID 17906881] Novel POMGnT1 mutations define broader phenotypic spectrum of muscle-eye-brain disease.
[PMID 20215985] Muscle-Eye-Brain disease.