rs281865117
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 6 | neurodegenerative disorder (ARSACS) |
(-;T) | 3 | carrier of a neurodegenerative disorder (ARSACS) mutation |
(T;T) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 23335032 |
Gene | SACS |
is a | snp |
is | mentioned by |
dbSNP | rs281865117 |
dbSNP (classic) | rs281865117 |
ClinGen | rs281865117 |
ebi | rs281865117 |
HLI | rs281865117 |
Exac | rs281865117 |
Gnomad | rs281865117 |
Varsome | rs281865117 |
LitVar | rs281865117 |
Map | rs281865117 |
PheGenI | rs281865117 |
Biobank | rs281865117 |
1000 genomes | rs281865117 |
hgdp | rs281865117 |
ensembl | rs281865117 |
geneview | rs281865117 |
scholar | rs281865117 |
rs281865117 | |
pharmgkb | rs281865117 |
gwascentral | rs281865117 |
openSNP | rs281865117 |
23andMe | rs281865117 |
SNPshot | rs281865117 |
SNPdbe | rs281865117 |
MSV3d | rs281865117 |
GWAS Ctlg | rs281865117 |
Max Magnitude | 6 |
c.8844delT (p.Ile2949Phefs)
23andMe name: i5012578
ClinVar | |
---|---|
Risk | Rs281865117(-;-) |
Alt | Rs281865117(-;-) |
Reference | Rs281865117(T;T) |
Significance | Pathogenic |
Disease | Spastic ataxia Charlevoix-Saguenay type not provided Spastic paraplegia |
Variation | info |
Gene | SACS |
CLNDBN | Spastic ataxia Charlevoix-Saguenay type not provided Spastic paraplegia |
Reversed | 1 |
HGVS | NC_000013.10:g.23909171delA |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000005847.4, RCV000338359.1, RCV000460039.1, |
[PMID 10655055] ARSACS, a spastic ataxia common in northeastern Quebec, is caused by mutations in a new gene encoding an 11.5-kb ORF.