rs28940870
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 4 | type II hereditary angioedema |
(A;C) | 4.1 | Hereditary angioedema, type II |
(C;C) | 0 | normal |
(C;T) | 4.1 | Hereditary angioedema |
(T;T) | 4 | type II hereditary angioedema |
Reference | GRCh38 38.1/141 |
Chromosome | 11 |
Position | 57614474 |
Gene | SERPING1 |
is a | snp |
is | mentioned by |
dbSNP | rs28940870 |
dbSNP (classic) | rs28940870 |
ClinGen | rs28940870 |
ebi | rs28940870 |
HLI | rs28940870 |
Exac | rs28940870 |
Gnomad | rs28940870 |
Varsome | rs28940870 |
LitVar | rs28940870 |
Map | rs28940870 |
PheGenI | rs28940870 |
Biobank | rs28940870 |
1000 genomes | rs28940870 |
hgdp | rs28940870 |
ensembl | rs28940870 |
geneview | rs28940870 |
scholar | rs28940870 |
rs28940870 | |
pharmgkb | rs28940870 |
gwascentral | rs28940870 |
openSNP | rs28940870 |
23andMe | rs28940870 |
SNPshot | rs28940870 |
SNPdbe | rs28940870 |
MSV3d | rs28940870 |
GWAS Ctlg | rs28940870 |
Max Magnitude | 4.1 |
rs28940870 represents two dominant (though rare) mutations in the SERPING1 gene, resulting in type II hereditary angioedema. [PMID 3178731]
rs28940870(A) is also known as c.1396C>A, p.Arg466Ser, R466S, Arg444Ser and R444S; rs28940870(T) is also known as c.1396C>T, p.Arg466Cys, R466C, Arg444Cys and R444C.
23andMe name for c.1396C>A: i6018367
ClinVar | |
---|---|
Risk | Rs28940870(A;A) Rs28940870(T;T) |
Alt | Rs28940870(A;A) Rs28940870(T;T) |
Reference | Rs28940870(C;C) |
Significance | Pathogenic |
Disease | Hereditary C1 esterase inhibitor deficiency - dysfunctional factor not provided |
Variation | info |
Gene | SERPING1 |
CLNDBN | Hereditary C1 esterase inhibitor deficiency - dysfunctional factor not provided |
Reversed | 0 |
HGVS | NC_000011.9:g.57381947C>A; NC_000011.9:g.57381947C>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) UniProtKB (variants) |
CLNACC | RCV000004154.2, RCV000059083.1, RCV000004153.2, RCV000059084.1, |
[PMID 22994404] Mutational spectrum and geno-phenotype correlation in Chinese families with hereditary angioedema.