rs3762271
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
Make rs3762271(A;A) |
Make rs3762271(A;C) |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 197101312 |
Gene | ASPM |
is a | snp |
is | mentioned by |
dbSNP | rs3762271 |
dbSNP (classic) | rs3762271 |
ClinGen | rs3762271 |
ebi | rs3762271 |
HLI | rs3762271 |
Exac | rs3762271 |
Gnomad | rs3762271 |
Varsome | rs3762271 |
LitVar | rs3762271 |
Map | rs3762271 |
PheGenI | rs3762271 |
Biobank | rs3762271 |
1000 genomes | rs3762271 |
hgdp | rs3762271 |
ensembl | rs3762271 |
geneview | rs3762271 |
scholar | rs3762271 |
rs3762271 | |
pharmgkb | rs3762271 |
gwascentral | rs3762271 |
openSNP | rs3762271 |
23andMe | rs3762271 |
SNPshot | rs3762271 |
SNPdbe | rs3762271 |
MSV3d | rs3762271 |
GWAS Ctlg | rs3762271 |
GMAF | 0.2461 |
Max Magnitude | 0 |
? | (A;A) (A;C) (C;C) | 28 |
---|---|---|
|
rs3762271 is an A/C SNP located in the ASPM gene. The A-allele of this SNP as well as the G-allele of rs964201 another SNP located in the ASPM gene and rs2442496 a SNP in the MCPH1 gene arose approximately 50,000 years ago and show strong positive selection in the lineage leading to humans. [PMID 16151010] A comment is provided by g2b2mh.
ClinVar | |
---|---|
Risk | rs3762271(A;A) rs3762271(T;T) |
Alt | rs3762271(A;A) rs3762271(T;T) |
Reference | Rs3762271(C;C) |
Significance | Non-pathogenic |
Disease | Primary autosomal recessive microcephaly 5 not specified Primary Microcephaly |
Variation | info |
Gene | ASPM |
CLNDBN | Primary autosomal recessive microcephaly 5 not specified Primary Microcephaly, Recessive |
Reversed | 1 |
HGVS | NC_000001.10:g.197070442G>T |
CLNSRC | UniProtKB (protein) |
CLNACC | RCV000020801.1, RCV000145204.2, RCV000295618.1, |