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rs3825932

From SNPedia

Orientationplus
Stabilizedplus
Make rs3825932(C;C)
Make rs3825932(C;T)
Make rs3825932(T;T)
ReferenceGRCh38 38.1/141
Chromosome15
Position78943104
GeneCTSH
is asnp
is mentioned by
dbSNPrs3825932
dbSNP (classic)rs3825932
ClinGenrs3825932
ebirs3825932
HLIrs3825932
Exacrs3825932
Gnomadrs3825932
Varsomers3825932
LitVarrs3825932
Maprs3825932
PheGenIrs3825932
Biobankrs3825932
1000 genomesrs3825932
hgdprs3825932
ensemblrs3825932
geneviewrs3825932
scholarrs3825932
googlers3825932
pharmgkbrs3825932
gwascentralrs3825932
openSNPrs3825932
23andMers3825932
SNPshotrs3825932
SNPdbers3825932
MSV3drs3825932
GWAS Ctlgrs3825932
GMAF0.3701
Max Magnitude0
? (C;C) (C;T) (T;T) 28


GWAS snp
PMID [PMID 18978792OA-icon.png]
Trait Type 1 diabetes
Title Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci
Risk Allele C
P-val 2.9999999999999998E-15
Odds Ratio 1.16 [1.10-1.22]
GWAS snp
PMID [PMID 19430480OA-icon.png]
Trait Type 1 diabetes
Title Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes
Risk Allele
P-val 8E-8
Odds Ratio NR NR
OMIM222100
DescDIABETES MELLITUS, INSULIN-DEPENDENT; IDDM
Variant
Relatedalso




[PMID 19073967OA-icon.png] Shared and distinct genetic variants in type 1 diabetes and celiac disease.


[PMID 20369022OA-icon.png] Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations.



[PMID 24982147OA-icon.png] CTSH regulates β-cell function and disease progression in newly diagnosed type 1 diabetes patients


[PMID 26245339] Polymorphisms in the CTSH gene may influence the progression of diabetic retinopathy: a candidate-gene study in the Danish Cohort of Pediatric Diabetes 1987 (DCPD1987)