rs397508097
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 5 | Romano-Ward Long QT Syndrome |
Make rs397508097(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 11 |
Position | 2768917 |
Gene | KCNQ1 |
is a | snp |
is | mentioned by |
dbSNP | rs397508097 |
dbSNP (classic) | rs397508097 |
ClinGen | rs397508097 |
ebi | rs397508097 |
HLI | rs397508097 |
Exac | rs397508097 |
Gnomad | rs397508097 |
Varsome | rs397508097 |
LitVar | rs397508097 |
Map | rs397508097 |
PheGenI | rs397508097 |
Biobank | rs397508097 |
1000 genomes | rs397508097 |
hgdp | rs397508097 |
ensembl | rs397508097 |
geneview | rs397508097 |
scholar | rs397508097 |
rs397508097 | |
pharmgkb | rs397508097 |
gwascentral | rs397508097 |
openSNP | rs397508097 |
23andMe | rs397508097 |
SNPshot | rs397508097 |
SNPdbe | rs397508097 |
MSV3d | rs397508097 |
GWAS Ctlg | rs397508097 |
Max Magnitude | 5 |
aka c.1991G>A (p.Gly664Asp) and in other literature c.1588C>T
Considered pathogenic for Long QT syndrome, but in at least one publication, also noted as of low penetrance [PMID 30609406]
ClinVar | |
---|---|
Risk | rs397508097(T;T) |
Alt | rs397508097(T;T) |
Reference | Rs397508097(C;C) |
Significance | Pathogenic |
Disease | Long QT syndrome not provided |
Variation | info |
Gene | KCNQ1 |
CLNDBN | Long QT syndrome not provided |
Reversed | 0 |
HGVS | NC_000011.9:g.2790147C>T |
CLNSRC | ClinVar |
CLNACC | RCV000046003.4, RCV000182204.4, |