rs564816
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common genotype |
Make rs564816(A;A) |
Make rs564816(A;C) |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 9 |
Position | 4015370 |
Gene | GLIS3 |
is a | snp |
is | mentioned by |
dbSNP | rs564816 |
dbSNP (classic) | rs564816 |
ClinGen | rs564816 |
ebi | rs564816 |
HLI | rs564816 |
Exac | rs564816 |
Gnomad | rs564816 |
Varsome | rs564816 |
LitVar | rs564816 |
Map | rs564816 |
PheGenI | rs564816 |
Biobank | rs564816 |
1000 genomes | rs564816 |
hgdp | rs564816 |
ensembl | rs564816 |
geneview | rs564816 |
scholar | rs564816 |
rs564816 | |
pharmgkb | rs564816 |
gwascentral | rs564816 |
openSNP | rs564816 |
23andMe | rs564816 |
SNPshot | rs564816 |
SNPdbe | rs564816 |
MSV3d | rs564816 |
GWAS Ctlg | rs564816 |
Max Magnitude | 0 |
? | (A;A) (A;C) (C;C) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 19901119] |
Trait | Methotrexate phramacokinetics (acute lymphoblastic leukemia) |
Title | Germline genetic variation in an organic anion transporter polypeptide associated with methotrexate pharmacokinetics and clinical effects. |
Risk Allele | C |
P-val | 3E-7 |
Odds Ratio | NR NR |