rs63751208
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 3 | Beta Thalassemia carrier; Hemoglobin beta-plus mutation |
(T;T) | 4.5 | Beta Thalassemia intermedia likely; Hemoglobin beta-plus; variable clinical symptoms |
Reference | GRCh38 38.1/141 |
Chromosome | 11 |
Position | 5227172 |
Gene | HBB |
is a | snp |
is | mentioned by |
dbSNP | rs63751208 |
dbSNP (classic) | rs63751208 |
ClinGen | rs63751208 |
ebi | rs63751208 |
HLI | rs63751208 |
Exac | rs63751208 |
Gnomad | rs63751208 |
Varsome | rs63751208 |
LitVar | rs63751208 |
Map | rs63751208 |
PheGenI | rs63751208 |
Biobank | rs63751208 |
1000 genomes | rs63751208 |
hgdp | rs63751208 |
ensembl | rs63751208 |
geneview | rs63751208 |
scholar | rs63751208 |
rs63751208 | |
pharmgkb | rs63751208 |
gwascentral | rs63751208 |
openSNP | rs63751208 |
23andMe | rs63751208 |
SNPshot | rs63751208 |
SNPdbe | rs63751208 |
MSV3d | rs63751208 |
GWAS Ctlg | rs63751208 |
Max Magnitude | 4.5 |
ClinVar | |
---|---|
Risk | Rs63751208(T;T) |
Alt | Rs63751208(T;T) |
Reference | Rs63751208(C;C) |
Significance | Pathogenic |
Disease | Beta-plus-thalassemia Beta Thalassemia |
Variation | info |
Gene | HBB |
CLNDBN | Beta-plus-thalassemia beta Thalassemia |
Reversed | 1 |
HGVS | NC_000011.9:g.5248402G>A |
CLNSRC | HBVAR OMIM Allelic Variant |
CLNACC | RCV000016719.26, RCV000169081.1, |
[PMID 2713503] A C----T substitution at nt--101 in a conserved DNA sequence of the promotor region of the beta-globin gene is associated with "silent" beta-thalassemia.
[PMID 2346726] The C-T substitution in the distal CACCC box of the beta-globin gene promoter is a common cause of silent beta thalassaemia in the Italian population.
[PMID 7909640] Binding of nuclear factors to the proximal and distal CACCC motifs of the beta-globin gene promoter: implications for the -101 (C-->T) 'silent' beta-thalassemia mutation.
[PMID 8172199] Genotype of subjects with borderline hemoglobin A2 levels: implication for beta-thalassemia carrier screening.
[PMID 8980256] Genetic analysis of beta-thalassemia intermedia in Israel: diversity of mechanisms and unpredictability of phenotype.