rs6442925
From SNPedia
Orientation | plus |
Stabilized | plus |
Make rs6442925(C;C) |
Make rs6442925(C;T) |
Make rs6442925(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 3 |
Position | 4972191 |
Gene | BHLHE40-AS1 |
is a | snp |
is | mentioned by |
dbSNP | rs6442925 |
dbSNP (classic) | rs6442925 |
ClinGen | rs6442925 |
ebi | rs6442925 |
HLI | rs6442925 |
Exac | rs6442925 |
Gnomad | rs6442925 |
Varsome | rs6442925 |
LitVar | rs6442925 |
Map | rs6442925 |
PheGenI | rs6442925 |
Biobank | rs6442925 |
1000 genomes | rs6442925 |
hgdp | rs6442925 |
ensembl | rs6442925 |
geneview | rs6442925 |
scholar | rs6442925 |
rs6442925 | |
pharmgkb | rs6442925 |
gwascentral | rs6442925 |
openSNP | rs6442925 |
23andMe | rs6442925 |
SNPshot | rs6442925 |
SNPdbe | rs6442925 |
MSV3d | rs6442925 |
GWAS Ctlg | rs6442925 |
GMAF | 0.1566 |
Max Magnitude | 0 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
This SNP is is found in an intergenetic part of chromosome 3. Along with rs534654 and rs1534891, rs6442925, is part of a 3-SNP (multi-locus) interaction that is associated with bipolar disorder.[PMID 18228528]
GWAS snp | |
---|---|
PMID | [PMID 21979947] |
Trait | |
Title | A genome-wide association study identifies a potential novel gene locus for keratoconus, one of the commonest causes for corneal transplantation in developed countries. |
Risk Allele | |
P-val | 0.000002 |
Odds Ratio | 1.5600 None |
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 3
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d