rs726070
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 1 | Two copies of a variant now thought likely to benign |
(A;G) | 1 | Carrier of a variant now thought likely to be benign |
(G;G) | 0 | common in clinvar |
Reference | GRCh38 38.1/142 |
Chromosome | 2 |
Position | 214948607 |
Gene | ABCA12, LOC101928103 |
is a | snp |
is | mentioned by |
dbSNP | rs726070 |
dbSNP (classic) | rs726070 |
ClinGen | rs726070 |
ebi | rs726070 |
HLI | rs726070 |
Exac | rs726070 |
Gnomad | rs726070 |
Varsome | rs726070 |
LitVar | rs726070 |
Map | rs726070 |
PheGenI | rs726070 |
Biobank | rs726070 |
1000 genomes | rs726070 |
hgdp | rs726070 |
ensembl | rs726070 |
geneview | rs726070 |
scholar | rs726070 |
rs726070 | |
pharmgkb | rs726070 |
gwascentral | rs726070 |
openSNP | rs726070 |
23andMe | rs726070 |
SNPshot | rs726070 |
SNPdbe | rs726070 |
MSV3d | rs726070 |
GWAS Ctlg | rs726070 |
GMAF | 0.01974 |
Max Magnitude | 1 |
aka c.7093G>A (p.Asp2365Asn)
The variant allele was reported over a decade ago as being a recessive mutation associated with a form of ichthyosis; however, more recent annotations have come to the conclusion that it is actually likely to be benign, in part since it's seen far more frequently than would be expected given how rare the actual condition is.
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
ClinVar | |
---|---|
Risk | Rs726070(A;A) |
Alt | Rs726070(A;A) |
Reference | Rs726070(G;G) |
Significance | Probable-non-pathogenic |
Disease | Autosomal recessive congenital ichthyosis 4B not specified Congenital ichthyosiform erythroderma |
Variation | info |
Gene | LOC101928103 ABCA12 |
CLNDBN | Autosomal recessive congenital ichthyosis 4B not specified Congenital ichthyosiform erythroderma |
Reversed | 1 |
HGVS | NC_000002.11:g.215813331C>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000002995.5, RCV000250672.1, RCV000293292.1, |