rs727504331
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(G;T) | 6 | Familial hypertrophic cardiomyopathy (possible) |
(T;T) | 0 | common in clinvar |
Make rs727504331(G;G) |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 1 |
Position | 201365242 |
Gene | TNNT2 |
is a | snp |
is | mentioned by |
dbSNP | rs727504331 |
dbSNP (classic) | rs727504331 |
ClinGen | rs727504331 |
ebi | rs727504331 |
HLI | rs727504331 |
Exac | rs727504331 |
Gnomad | rs727504331 |
Varsome | rs727504331 |
LitVar | rs727504331 |
Map | rs727504331 |
PheGenI | rs727504331 |
Biobank | rs727504331 |
1000 genomes | rs727504331 |
hgdp | rs727504331 |
ensembl | rs727504331 |
geneview | rs727504331 |
scholar | rs727504331 |
rs727504331 | |
pharmgkb | rs727504331 |
gwascentral | rs727504331 |
openSNP | rs727504331 |
23andMe | rs727504331 |
SNPshot | rs727504331 |
SNPdbe | rs727504331 |
MSV3d | rs727504331 |
GWAS Ctlg | rs727504331 |
Max Magnitude | 6 |
The rare minor allele of this variant is reported to be pathogenic/likely pathogenic for familial hypertrophic cardiomyopathy (HCM), according to [PMID 25611685].
ClinVar | |
---|---|
Risk | rs727504331(G;G) |
Alt | rs727504331(G;G) |
Reference | Rs727504331(T;T) |
Significance | Probable-Pathogenic |
Disease | not provided Primary familial hypertrophic cardiomyopathy |
Variation | info |
Gene | TNNT2 |
CLNDBN | not provided Primary familial hypertrophic cardiomyopathy |
Reversed | 1 |
HGVS | NC_000001.10:g.201334370A>C |
CLNSRC | Children's Hospital of Eastern Ontario |
CLNACC | RCV000159288.3, RCV000211744.1, |