rs730881972
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;G) | 5.8 | Likely miscall in 23andMe v4 (or older) and Ancestry v2c/v2d data; otherwise, STK11 gene mutation associated with Peutz-Jeghers syndrome |
(G;G) | 0 | common in clinvar |
Make rs730881972(C;C) |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 19 |
Position | 1220395 |
Gene | STK11 |
is a | snp |
is | mentioned by |
dbSNP | rs730881972 |
dbSNP (classic) | rs730881972 |
ClinGen | rs730881972 |
ebi | rs730881972 |
HLI | rs730881972 |
Exac | rs730881972 |
Gnomad | rs730881972 |
Varsome | rs730881972 |
LitVar | rs730881972 |
Map | rs730881972 |
PheGenI | rs730881972 |
Biobank | rs730881972 |
1000 genomes | rs730881972 |
hgdp | rs730881972 |
ensembl | rs730881972 |
geneview | rs730881972 |
scholar | rs730881972 |
rs730881972 | |
pharmgkb | rs730881972 |
gwascentral | rs730881972 |
openSNP | rs730881972 |
23andMe | rs730881972 |
SNPshot | rs730881972 |
SNPdbe | rs730881972 |
MSV3d | rs730881972 |
GWAS Ctlg | rs730881972 |
Max Magnitude | 5.8 |
c.487G>C (p.Gly163Arg)
23andMe name: i6018852
ClinVar | |
---|---|
Risk | rs730881972(C;C) rs730881972(T;T) |
Alt | rs730881972(C;C) rs730881972(T;T) |
Reference | Rs730881972(G;G) |
Significance | Probable-Pathogenic |
Disease | Hereditary cancer-predisposing syndrome Squamous cell carcinoma of lung |
Variation | info |
Gene | STK11 |
CLNDBN | Hereditary cancer-predisposing syndrome Squamous cell carcinoma of lung |
Reversed | 0 |
HGVS | NC_000019.9:g.1220394G>C; NC_000019.9:g.1220394G>T |
CLNSRC | |
CLNACC | RCV000492450.1, RCV000431280.1, |