rs77804083
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 3 | carrier of a spinal muscular atrophy disease allele |
(T;T) | 6 | Spinal muscular atrophy, type 2 |
Reference | GRCh38 38.1/142 |
Chromosome | 5 |
Position | 70942389 |
Gene | SMN1 |
is a | snp |
is | mentioned by |
dbSNP | rs77804083 |
dbSNP (classic) | rs77804083 |
ClinGen | rs77804083 |
ebi | rs77804083 |
HLI | rs77804083 |
Exac | rs77804083 |
Gnomad | rs77804083 |
Varsome | rs77804083 |
LitVar | rs77804083 |
Map | rs77804083 |
PheGenI | rs77804083 |
Biobank | rs77804083 |
1000 genomes | rs77804083 |
hgdp | rs77804083 |
ensembl | rs77804083 |
geneview | rs77804083 |
scholar | rs77804083 |
rs77804083 | |
pharmgkb | rs77804083 |
gwascentral | rs77804083 |
openSNP | rs77804083 |
23andMe | rs77804083 |
SNPshot | rs77804083 |
SNPdbe | rs77804083 |
MSV3d | rs77804083 |
GWAS Ctlg | rs77804083 |
Merged from | Rs104893929 |
Max Magnitude | 6 |
rs77804083, also known as c.305G>A, p.Trp102Ter and Y102X, is a mutation in the SMN1 gene on chromosome 5.
The rare rs77804083(T) allele is a mutation associated with the recessively inherited type 2 spinal muscular atrophy.
This SNP is referred to as i5005733 by 23andMe.
ClinVar | |
---|---|
Risk | Rs77804083(T;T) |
Alt | Rs77804083(T;T) |
Reference | Rs77804083(C;C) |
Significance | Pathogenic |
Disease | Spinal muscular atrophy Kugelberg-Welander disease |
Variation | info |
Gene | SMN1 |
CLNDBN | Spinal muscular atrophy, type II Kugelberg-Welander disease |
Reversed | 1 |
HGVS | NC_000005.9:g.70238216G>A |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000009746.2, RCV000009747.2, |