rs786202033
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;C) | 6.7 | CDH1-based gastric cancer risk |
(C;C) | 0 | common in clinvar |
Make rs786202033(-;-) |
Reference | GRCh38.p2 38.2/146 |
Chromosome | 16 |
Position | 68823461 |
Gene | CDH1 |
is a | snp |
is | mentioned by |
dbSNP | rs786202033 |
dbSNP (classic) | rs786202033 |
ClinGen | rs786202033 |
ebi | rs786202033 |
HLI | rs786202033 |
Exac | rs786202033 |
Gnomad | rs786202033 |
Varsome | rs786202033 |
LitVar | rs786202033 |
Map | rs786202033 |
PheGenI | rs786202033 |
Biobank | rs786202033 |
1000 genomes | rs786202033 |
hgdp | rs786202033 |
ensembl | rs786202033 |
geneview | rs786202033 |
scholar | rs786202033 |
rs786202033 | |
pharmgkb | rs786202033 |
gwascentral | rs786202033 |
openSNP | rs786202033 |
23andMe | rs786202033 |
SNPshot | rs786202033 |
SNPdbe | rs786202033 |
MSV3d | rs786202033 |
GWAS Ctlg | rs786202033 |
Max Magnitude | 6.7 |
Also known as c.1999delC, the minor allele is considered a pathogenic rare mutation for hereditary diffuse gastric cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs786202033(-;-) |
Alt | rs786202033(-;-) |
Reference | Rs786202033(C;C) |
Significance | Pathogenic |
Disease | Hereditary cancer-predisposing syndrome not provided |
Variation | info |
Gene | CDH1 |
CLNDBN | Hereditary cancer-predisposing syndrome not provided |
Reversed | 0 |
HGVS | NC_000016.9:g.68857364delC |
CLNSRC | |
CLNACC | RCV000164640.1, RCV000376724.1, |