rs794727444
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 6 | Early infantile epileptic encephalopathy and also benign infantile spasms |
(G;G) | 0 | common in clinvar |
Make rs794727444(A;A) |
Reference | GRCh38.p2 38.2/146 |
Chromosome | 2 |
Position | 165389451 |
Gene | SCN2A |
is a | snp |
is | mentioned by |
dbSNP | rs794727444 |
dbSNP (classic) | rs794727444 |
ClinGen | rs794727444 |
ebi | rs794727444 |
HLI | rs794727444 |
Exac | rs794727444 |
Gnomad | rs794727444 |
Varsome | rs794727444 |
LitVar | rs794727444 |
Map | rs794727444 |
PheGenI | rs794727444 |
Biobank | rs794727444 |
1000 genomes | rs794727444 |
hgdp | rs794727444 |
ensembl | rs794727444 |
geneview | rs794727444 |
scholar | rs794727444 |
rs794727444 | |
pharmgkb | rs794727444 |
gwascentral | rs794727444 |
openSNP | rs794727444 |
23andMe | rs794727444 |
SNPshot | rs794727444 |
SNPdbe | rs794727444 |
MSV3d | rs794727444 |
GWAS Ctlg | rs794727444 |
Max Magnitude | 6 |
rs794727444, also known as c.5645G>A, p.Arg1882Gln and R1882Q, is a rare variant in the SCN2A gene on chromosome 2.
The rs794727444(A) allele is reported by multiple sources in ClinVar to be associated with both benign familial neonatal-infantile seizures (BFNIS) and early infantile epileptic encephalopathy, type 11.
ClinVar | |
---|---|
Risk | rs794727444(A;A) rs794727444(T;T) |
Alt | rs794727444(A;A) rs794727444(T;T) |
Reference | Rs794727444(G;G) |
Significance | Pathogenic |
Disease | Benign familial neonatal-infantile seizures Early infantile epileptic encephalopathy 11 not provided Epileptic encephalopathy |
Variation | info |
Gene | SCN2A |
CLNDBN | Benign familial neonatal-infantile seizures Early infantile epileptic encephalopathy 11 not provided Epileptic encephalopathy |
Reversed | 0 |
HGVS | NC_000002.11:g.166245961G>A; NC_000002.11:g.166245961G>T |
CLNSRC | |
CLNACC | RCV000176762.1, RCV000176763.1, RCV000189181.2, RCV000417008.1, RCV000189182.3, |