rs79556279
From SNPedia
(T) allele has increased risk of Behçet's disease |
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common in complete genomics |
(G;T) | 4.11 | increased risk of Behçet's disease |
(T;T) | 4.11 | increased risk of Behçet's disease |
Reference | GRCh38.p2 38.2/147 |
Chromosome | 6 |
Position | 31362069 |
is a | snp |
is | mentioned by |
dbSNP | rs79556279 |
dbSNP (classic) | rs79556279 |
ClinGen | rs79556279 |
ebi | rs79556279 |
HLI | rs79556279 |
Exac | rs79556279 |
Gnomad | rs79556279 |
Varsome | rs79556279 |
LitVar | rs79556279 |
Map | rs79556279 |
PheGenI | rs79556279 |
Biobank | rs79556279 |
1000 genomes | rs79556279 |
hgdp | rs79556279 |
ensembl | rs79556279 |
geneview | rs79556279 |
scholar | rs79556279 |
rs79556279 | |
pharmgkb | rs79556279 |
gwascentral | rs79556279 |
openSNP | rs79556279 |
23andMe | rs79556279 |
SNPshot | rs79556279 |
SNPdbe | rs79556279 |
MSV3d | rs79556279 |
GWAS Ctlg | rs79556279 |
Max Magnitude | 4.11 |
Primary risk for Behçet's disease associated with the minor (T) allele of rs79556279 [PMID 24821759] [PMID 24876276] [PMID 24286189]
A meta-analysis totaling ~5,000 Behçet's disease (BD) patients from 78 independent studies calculated a pooled odds ratio of 5.78 (CI: 5.0-6.7) for HLA-B51/B5 allele carriers to develop BD compared with noncarriers.[PMID 19790126]